Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fadD_3AMP-binding enzyme family protein. (542 aa)    
Predicted Functional Partners:
lgrD_1
NRPS-para261: non-ribosomal peptide synthase TIGR01720 domain protein.
  
 0.929
tycC_2
AA-adenyl-dom: amino acid adenylation domain protein.
  
 0.929
DM82_2123
Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein.
  
 
  0.926
DM82_76
Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein.
  
 
  0.926
fadD_9
AMP-binding enzyme family protein.
  
  
 
0.916
eryA_1
Zinc-binding dehydrogenase family protein.
  
 0.898
ppsE_2
AMP-binding enzyme family protein.
  
 0.889
pksM
Thioester-redct: thioester reductase domain protein.
  
 0.839
bbsG_1
Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein.
  
 
  0.781
bbsG_2
Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein.
  
 
  0.761
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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