Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
DM82_1723Hypothetical protein; nfeD-like C-terminal, partner-binding family protein. (144 aa)    
Predicted Functional Partners:
cobS
Cobalamin-5-phosphate synthase family protein; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
   
    0.854
qmcA_1
SPFH domain / Band 7 family protein.
 
 
 0.850
DM82_426
Hypothetical protein.
  
     0.752
DM82_1514
Putative membrane protein.
  
     0.740
cobJ
cobJ_cbiH: precorrin-3B C17-methyltransferase.
  
    0.715
DM82_2138
Hypothetical protein.
  
     0.709
DM82_2263
Transglycosylase SLT domain protein.
  
    0.679
DM82_3300
Thioredoxin family protein.
 
    0.676
ftsL
Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.
  
     0.656
DM82_3015
H-NS histone family protein.
  
     0.641
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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