Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pcpPseudomonalisin. (630 aa)    
Predicted Functional Partners:
plcN_4
Phosphoesterase family protein.
  
     0.674
mntH_3
Natural resistance-associated macrophage family protein.
  
     0.645
hoxN
High-affinity nickel transport protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
  
     0.631
DM82_2113
Acetyltransferase family protein.
  
     0.542
ga1
Glucoamylase.
  
     0.529
DM82_5422
Putative lipoprotein.
  
     0.515
bcsE
cellulose_bcsE: cellulose biosynthesis protein BcsE.
  
     0.514
DM82_317
Hypothetical protein.
  
     0.492
lifO
Lipase chaperone; May be involved in the folding of the extracellular lipase during its passage through the periplasm; Belongs to the lipase chaperone family.
  
     0.488
plcA_1
Phosphoesterase family protein.
  
     0.472
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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