Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM82_1828 | DM82_1829 | DM82_1828 | DM82_1829 | Putative dhha1 domain protein. | Transposase domain protein. | 0.476 |
DM82_1828 | DM82_1878 | DM82_1828 | DM82_1878 | Putative dhha1 domain protein. | comEC_Rec2: DNA internalization-related competence protein ComEC/Rec2. | 0.465 |
DM82_1828 | dinG_3 | DM82_1828 | DM82_2195 | Putative dhha1 domain protein. | Dnaq: exonuclease, DNA polymerase III, epsilon subunit family domain protein. | 0.442 |
DM82_1828 | lip-1 | DM82_1828 | DM82_1827 | Putative dhha1 domain protein. | Autotrans_barl: outer membrane autotransporter barrel domain protein. | 0.530 |
DM82_1828 | topB | DM82_1828 | DM82_3299 | Putative dhha1 domain protein. | topB: DNA topoisomerase III family protein. | 0.407 |
DM82_1828 | yebS_1 | DM82_1828 | DM82_2544 | Putative dhha1 domain protein. | Paraquat-inducible A family protein. | 0.472 |
DM82_1829 | DM82_1828 | DM82_1829 | DM82_1828 | Transposase domain protein. | Putative dhha1 domain protein. | 0.476 |
DM82_1878 | DM82_1828 | DM82_1878 | DM82_1828 | comEC_Rec2: DNA internalization-related competence protein ComEC/Rec2. | Putative dhha1 domain protein. | 0.465 |
DM82_1878 | dinG_3 | DM82_1878 | DM82_2195 | comEC_Rec2: DNA internalization-related competence protein ComEC/Rec2. | Dnaq: exonuclease, DNA polymerase III, epsilon subunit family domain protein. | 0.427 |
dinG_3 | DM82_1828 | DM82_2195 | DM82_1828 | Dnaq: exonuclease, DNA polymerase III, epsilon subunit family domain protein. | Putative dhha1 domain protein. | 0.442 |
dinG_3 | DM82_1878 | DM82_2195 | DM82_1878 | Dnaq: exonuclease, DNA polymerase III, epsilon subunit family domain protein. | comEC_Rec2: DNA internalization-related competence protein ComEC/Rec2. | 0.427 |
dinG_3 | topB | DM82_2195 | DM82_3299 | Dnaq: exonuclease, DNA polymerase III, epsilon subunit family domain protein. | topB: DNA topoisomerase III family protein. | 0.466 |
lip-1 | DM82_1828 | DM82_1827 | DM82_1828 | Autotrans_barl: outer membrane autotransporter barrel domain protein. | Putative dhha1 domain protein. | 0.530 |
topB | DM82_1828 | DM82_3299 | DM82_1828 | topB: DNA topoisomerase III family protein. | Putative dhha1 domain protein. | 0.407 |
topB | dinG_3 | DM82_3299 | DM82_2195 | topB: DNA topoisomerase III family protein. | Dnaq: exonuclease, DNA polymerase III, epsilon subunit family domain protein. | 0.466 |
yebS_1 | DM82_1828 | DM82_2544 | DM82_1828 | Paraquat-inducible A family protein. | Putative dhha1 domain protein. | 0.472 |