Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DM82_1928Lactonase, 7-bladed beta-propeller family protein. (330 aa)    
Predicted Functional Partners:
DM82_1927
Fatty acid hydroxylase superfamily protein.
 
     0.935
norB
Cytochrome C and Quinol oxidase polypeptide I family protein.
  
 
 0.731
DM82_4148
Radical SAM superfamily protein.
 
  
 0.624
hrpA
DEAH_box_HrpA: ATP-dependent helicase HrpA.
       0.615
lgrD_1
NRPS-para261: non-ribosomal peptide synthase TIGR01720 domain protein.
  
  
 0.583
tycC_2
AA-adenyl-dom: amino acid adenylation domain protein.
  
  
 0.583
argA
N-Ac-Glu-synth: amino-acid N-acetyltransferase; Belongs to the acetyltransferase family. ArgA subfamily.
 
     0.575
cyt_1
Cytochrome c family protein.
  
  
 0.556
cyt_2
Cytochrome c-551 domain protein.
  
  
 0.556
DM82_6211
Cytochrome c family protein.
  
  
 0.556
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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