Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
veshutD family protein. (211 aa)    
Predicted Functional Partners:
hutC
His_ut_repres: histidine utilization repressor.
 
  
 0.949
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
  
 0.933
hutF
hutF: formiminoglutamate deiminase.
 
    0.932
hutI
hutI: imidazolonepropionase.
 
  
 0.927
hutG
hutG_amidohyd: N-formylglutamate deformylase.
 
    0.893
hutC-2
His_ut_repres: histidine utilization repressor.
 
  
 0.864
hutH
hutH: histidine ammonia-lyase.
 
  
 0.814
hutH_2
Aromatic amino acid lyase family protein.
 
  
 0.498
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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