Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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dacBPBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase. (514 aa)    
Predicted Functional Partners:
dacC
D-alanyl-D-alanine carboxypeptidase family protein; Belongs to the peptidase S11 family.
     
 0.913
dacA
D-alanyl-D-alanine carboxypeptidase family protein; Belongs to the peptidase S11 family.
     
 0.913
DM82_1577
Ankyrin repeat family protein.
 
 
 
 0.817
DM82_837
Caspase domain protein.
   
 
 0.762
rssA_3
HAMP domain protein.
  
  
 0.614
DM82_2627
Aldose 1-epimerase family protein.
  
  
 0.539
yeaD
Aldose 1-epimerase family protein.
  
  
 0.539
basR_4
Response regulator.
  
  
 0.531
ldcA
LD-carboxypeptidase family protein.
 
   
 0.493
evgS
Response regulator.
  
  
 0.488
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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