Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DM82_2020FAD dependent oxidoreductase family protein. (390 aa)    
Predicted Functional Partners:
gcvT_2
soxA: sarcosine oxidase, alpha subunit; Belongs to the GcvT family.
 
 
 0.891
soxD
Subunit delta of sarcosine oxidase.
 
 
 0.653
soxA_1
FAD dependent oxidoreductase family protein.
  
     0.610
DM82_5559
Sarcosine oxidase, gamma subunit.
 
 
 0.574
braC_2
Receptor ligand binding region family protein.
       0.530
soxB_2
soxB: sarcosine oxidase, beta subunit.
  
     0.513
DM82_3147
CYTH domain protein.
  
     0.497
cytC3
cytC3.
  
 
   0.459
DM82_6277
Deoxyribonuclease II family protein.
  
     0.453
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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