STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
DM82_2123Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein. (596 aa)    
Predicted Functional Partners:
fadD_9
AMP-binding enzyme family protein.
  
 
 0.932
fadD_3
AMP-binding enzyme family protein.
  
 
  0.926
DM82_76
Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein.
  
  
 
0.907
DM82_77
enoyl-CoA hydratase/isomerase family protein.
 
 0.866
fadJ_1
enoyl-CoA hydratase/isomerase family protein.
 
 0.862
etfA_2
Electron transfer flavoFAD-binding domain protein.
 
 
 0.860
etfB
Electron transfer flavodomain protein.
 
 
 0.850
fadB
enoyl-CoA hydratase/isomerase family protein.
  
 0.835
fadJ_2
enoyl-CoA hydratase/isomerase family protein.
  
 0.835
echA8_6
enoyl-CoA hydratase/isomerase family protein.
 
 0.782
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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