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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
etfBElectron transfer flavodomain protein. (249 aa)    
Predicted Functional Partners:
etfA_2
Electron transfer flavoFAD-binding domain protein.
 0.999
DM82_982
FAD binding domain protein; Accepts electrons from ETF and reduces ubiquinone.
 
 0.999
DM82_897
Electron transfer flavodomain protein.
 0.996
etfA_3
Electron transfer flavodomain protein.
 
 0.991
DM82_5792
Electron transfer flavodomain protein.
 
 0.979
fadH_1
NADH:flavin oxidoreductase / NADH oxidase family protein.
  
 
 0.960
fadH_2
NADH:flavin oxidoreductase / NADH oxidase family protein.
  
 
 0.960
DM82_4589
Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein.
 
 
 0.891
DM82_2123
Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein.
 
 
 0.838
sucD
succinate-CoA ligase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
  
  
 0.835
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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