Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
psaAPeriplasmic solute binding family protein; Belongs to the bacterial solute-binding protein 9 family. (326 aa)    
Predicted Functional Partners:
mntB
ABC 3 transport family protein.
 
  
 0.996
znuC
ABC transporter family protein.
 
   
 0.948
rpmB
L28: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.772
zur
Ferric uptake regulator family protein; Belongs to the Fur family.
  
  
 0.757
rpsN
Ribosomal S14p/S29e family protein; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
  
 0.708
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
     
 0.660
cobW
cobW: cobalamin biosynthesis protein CobW.
  
  
 0.641
yjiA_2
Hypothetical protein; Cobalamin synthesis cobW C-terminal domain protein.
  
  
 0.641
DM82_3392
Hypothetical protein; Cobalamin synthesis cobW C-terminal domain protein.
  
  
 0.641
DM82_5135
Putative DNA-binding domain protein.
  
  
 0.518
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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