Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DM82_2217YXWGXW repeat family protein. (116 aa)    
Predicted Functional Partners:
DM82_5127
Autotrans_barl: outer membrane autotransporter barrel domain protein.
  
  
 0.625
DM82_2949
Hypothetical protein.
  
     0.607
DM82_6104
Glycosyl transferases group 1 family protein.
  
     0.598
lgrD_1
NRPS-para261: non-ribosomal peptide synthase TIGR01720 domain protein.
 
  
 0.583
DM82_2252
Hypothetical protein.
  
     0.576
DM82_1878
comEC_Rec2: DNA internalization-related competence protein ComEC/Rec2.
  
  
 0.553
andAd
Ring hydroxylating beta subunit.
  
     0.525
tycC_2
AA-adenyl-dom: amino acid adenylation domain protein.
  
  
 0.515
DM82_3621
vanZ like family protein.
  
     0.514
bfrD
tonB-siderophor: TonB-dependent siderophore receptor family protein.
  
 
 
 0.514
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.