Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
trxBTRX_reduct: thioredoxin-disulfide reductase. (320 aa)    
Predicted Functional Partners:
trxA
Thioredoxin: thioredoxin; Belongs to the thioredoxin family.
 
 0.968
sufS
Cysteine desulfurase, SufS family protein; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 
  0.923
sufS-2
sufS: cysteine desulfurase, SufS family protein; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 
  0.920
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
     
 0.913
mdeA_1
Aminotransferase class I and II family protein.
   
 
 0.905
trxA-2
Thioredoxin: thioredoxin.
  
 
 0.749
smrA
Smr domain protein.
       0.662
rpsA
Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
 
    0.661
DM82_3300
Thioredoxin family protein.
  
 
 0.659
lolA
Outer membrane lipocarrier LolA family protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
    0.639
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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