Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
mtlKMannitol dehydrogenase Rossmann domain protein. (463 aa)    
Predicted Functional Partners:
xylB
xylB: xylulokinase.
 
 
 0.978
xylB-2
xylB: xylulokinase.
 
 
 0.944
fruA
PTS system fructose-specific EIIBC component.
  
 
 0.944
DM82_3540
pfkB carbohydrate kinase family protein.
 
  
 0.939
xylB_2
Hypothetical protein; FGGY family of carbohydrate kinase, N-terminal domain protein.
 
 
 0.935
sacC
Hypothetical protein; Glycosyl hydrolases family 32 N-terminal domain protein; Belongs to the glycosyl hydrolase 32 family.
     
 0.919
lyx
Hypothetical protein; FGGY family of carbohydrate kinase, N-terminal domain protein.
  
 
 0.917
ptsP-3
PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase.
  
  
 0.913
DM82_5405
D-xylulose reductase.
    
 0.910
iolC_2
Hypothetical protein.
    
 0.908
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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