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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM82_2339Glycosyl transferase 2 family protein. (574 aa)    
Predicted Functional Partners:
DM82_2340
Glycosyl transferase 2 family protein.
 
  
 0.945
DM82_2342
Acyltransferase family protein.
 
   
 0.805
DM82_2344
ABC-2 type transporter family protein.
 
   
 0.724
DM82_2343
ABC transporter family protein.
 
   
 0.711
DM82_2341
3-beta hydroxysteroid dehydrogenase/isomerase family protein.
 
   
 0.698
DM82_2338
Glycosyl transferase 2 family protein.
 
   
0.669
coq7
Ubiquinone biosynthesis COQ7 family protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
   
 0.652
cmdD_1
AA-adenyl-dom: amino acid adenylation domain protein.
 
 0.591
DM82_4546
Acyltransferase family protein.
 
   
 0.567
tycC_2
AA-adenyl-dom: amino acid adenylation domain protein.
 
 
 0.564
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.