STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DM82_2392Bacterial extracellular solute-binding family protein. (260 aa)    
Predicted Functional Partners:
modB
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 
 0.976
modA
modA: molybdate ABC transporter, periplasmic molybdate-binding protein.
     
  0.900
potA_6
ABC transporter family protein.
    
 0.844
DM82_2152
Bacterial regulatory helix-turn-helix, lysR family protein.
     
 0.503
DM82_5496
Peptidase M20/M25/M40 family protein.
  
     0.499
cysT
Sulfate ABC transporter, permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 
 0.498
phnU
phnU: 2-aminoethylphosphonate ABC transporter, permease protein.
  
 
 0.498
modB_1
Binding--dependent transport system inner membrane component family protein.
  
 
 0.498
gltB_2
Glutamine amidotransferases class-II family protein.
  
  
 0.488
DM82_4799
Rhodanese-like domain protein.
 
  
 0.484
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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