Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
wcaJ_1EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase family protein. (355 aa)    
Predicted Functional Partners:
DM82_2447
Eps_transp_fam: exopolysaccharide transport family protein.
 
  
 0.928
DM82_2449
Polysaccharide biosynthesis/export family protein.
 
  
 0.873
etk
cobQ/CobB/MinD/ParA nucleotide binding domain protein.
 
  
 0.873
wzc
Eps_fam: capsular exopolysaccharide family domain protein.
 
  
 0.870
algA_4
GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.863
cotSA_2
Glycosyl transferases group 1 family protein.
 
  
 0.813
ptp_1
Low molecular weight phosphotyrosine phosphatase family protein.
  
  
 0.780
pimB
Glycosyl transferases group 1 family protein.
 
  
 0.723
DM82_2446
Polysaccharide biosynthesis family protein.
  
  
 0.657
rfbX
Polysaccharide biosynthesis family protein.
 
  
 0.630
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
Server load: low (12%) [HD]