Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gnoShort chain dehydrogenase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (261 aa)    
Predicted Functional Partners:
DM82_2463
Capsule polysaccharide biosynthesis family protein.
     0.972
eryA_1
Zinc-binding dehydrogenase family protein.
 
 
 0.928
DM82_2461
Sulfatase family protein.
 
   
 0.900
kbl_1
cys/Met metabolism PLP-dependent enzyme family protein.
 
 
 0.831
lpxC_1
UDP-3-O-acyl N-acetylglycosamine deacetylase family protein; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.
       0.785
DM82_2457
Acetyltransferase family protein.
   
   0.720
lgrD_1
NRPS-para261: non-ribosomal peptide synthase TIGR01720 domain protein.
  
 
 0.697
tycC_2
AA-adenyl-dom: amino acid adenylation domain protein.
  
 
 0.697
budC_4
Short-chain dehydrogenase/reductase SDR.
  
     0.652
budC_3
Short chain dehydrogenase family protein.
  
     0.643
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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