Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DM82_2468Glycosyl transferases group 1 family protein. (372 aa)    
Predicted Functional Partners:
gmd_2
3-beta hydroxysteroid dehydrogenase/isomerase family protein.
 
  
 0.914
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 
  
 0.842
DM82_2471
Glycosyl transferases group 1 family protein.
 
    
0.689
gca_4
3-beta hydroxysteroid dehydrogenase/isomerase family protein.
 
  
 0.670
DM82_2467
Glycosyl transferases group 1 family protein.
   
0.617
treZ
Carbohydrate-binding module 48 family protein; Belongs to the glycosyl hydrolase 13 family.
   
 0.615
pimB
Glycosyl transferases group 1 family protein.
 
     0.604
wcaJ_2
wcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.593
wcaJ_3
wcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.585
DM82_2473
fkbM_fam: methyltransferase, FkbM family domain protein.
 
  
 0.570
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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