Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gmd_23-beta hydroxysteroid dehydrogenase/isomerase family protein. (297 aa)    
Predicted Functional Partners:
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 
  
 
0.983
gmd-2
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 
  
 
0.930
wcaJ_2
wcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.923
wcaJ_3
wcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.922
DM82_2468
Glycosyl transferases group 1 family protein.
 
  
 0.914
gca_4
3-beta hydroxysteroid dehydrogenase/isomerase family protein.
  
  
 
0.904
DM82_2467
Glycosyl transferases group 1 family protein.
 
  
 0.768
DM82_2471
Glycosyl transferases group 1 family protein.
 
  
 0.752
DM82_2473
fkbM_fam: methyltransferase, FkbM family domain protein.
 
  
 0.617
wcaJ_1
EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase family protein.
 
  
 0.615
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.