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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM82_2514FAD binding domain protein. (468 aa)    
Predicted Functional Partners:
maeB_1
Malic enzyme, NAD binding domain protein.
  
 
 0.930
maeB
NADP-dependent malic enzyme; Belongs to the malic enzymes family.
  
 
 0.930
mdlB_3
FMN-dependent dehydrogenase family protein.
  
 0.928
lldD
Hypothetical protein; Conserved region in glutamate synthase family protein.
  
 0.926
ppsA
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
    
 0.909
ldhA
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein.
   
 0.908
pdhA
Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).
    
 0.908
pyk
Pyruv_kin: pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.907
pyk-2
Pyruv_kin: pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.907
pyk-3
Pyruv_kin: pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.907
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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