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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DM82_2515FAD binding domain protein. (497 aa)    
Predicted Functional Partners:
DM82_2516
FAD binding domain protein.
 
 0.992
lutA_2
4Fe-4S binding domain protein.
 
 0.991
DM82_4409
FAD binding domain protein.
 
 0.982
glpC_2
4Fe-4S binding domain protein.
 
 
 0.981
eda
Eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein.
   
 
 0.909
aceB
malate_syn_A: malate synthase A; Belongs to the malate synthase family.
  
 
 0.908
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
 
 0.908
ghrB
Glyoxylate/hydroxypyruvate reductase B; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.907
ppaX
HAD-SF-IA-v1: HAD hydrolase, IA, variant 1 family protein.
    
 0.907
ghrB_2
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein.
   
 0.907
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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