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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM82_2516FAD binding domain protein. (362 aa)    
Predicted Functional Partners:
lutA_2
4Fe-4S binding domain protein.
 
 
 0.995
DM82_2515
FAD binding domain protein.
 
 0.991
glpC_2
4Fe-4S binding domain protein.
 
 
 0.982
glcD
glcD: glycolate oxidase, subunit GlcD.
 
0.946
katE
Catalase family protein; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.915
aceB
malate_syn_A: malate synthase A; Belongs to the malate synthase family.
  
 
 0.911
DM82_3232
Catalase family protein.
   
 0.911
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
 
 0.911
ghrB
Glyoxylate/hydroxypyruvate reductase B; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.908
ghrB_2
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein.
   
 0.908
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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