close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phnW_12-aminoethylphosphonate aminotransferase family protein; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily. (398 aa)    
Predicted Functional Partners:
DM82_2522
phytanoyl-CoA dioxygenase family protein.
 
  
  0.985
aepY
ppyr-DeCO2ase: phosphonopyruvate decarboxylase.
 
 
 0.977
aepY-2
ppyr-DeCO2ase: phosphonopyruvate decarboxylase.
 
 
 0.967
phnY
phnAcAld_DH: putative phosphonoacetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.925
phnW_2
2-aminoethylphosphonate aminotransferase family protein; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.
  
  
 
0.920
phnY-2
phnAcAld_DH: putative phosphonoacetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.914
phnW
2-aminoethylphosphonate--pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.
  
  
 
0.913
aepX-3
PEP_mutase: phosphoenolpyruvate phosphomutase.
 
  
 0.828
aepX-4
PEP_mutase: phosphoenolpyruvate phosphomutase.
 
  
 0.824
aepX-2
PEP_mutase: phosphoenolpyruvate phosphomutase.
 
  
 0.755
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.