Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DM82_2546Mce related family protein. (551 aa)    
Predicted Functional Partners:
yebS_2
Paraquat-inducible A family protein.
 
 0.992
yebS_1
Paraquat-inducible A family protein.
 
 
 0.987
DM82_2547
Hypothetical protein.
 
   
 0.975
yceJ_1
Prokaryotic cytochrome b561 family protein.
       0.529
yceI_2
yceI-like domain protein; Belongs to the UPF0312 family.
       0.513
DM82_2549
Site-specific recombinase family protein.
       0.482
DM82_3
NUDIX domain protein.
 
    0.465
DM82_202
Carboxypeptidase regulatory-like domain protein.
  
     0.463
DM82_2548
Hypothetical protein.
       0.453
DM82_6123
Hypothetical protein.
  
     0.402
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.