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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gntTgntP: transporter, gluconate:H+ symporter family protein. (453 aa)    
Predicted Functional Partners:
gntK
Therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family protein.
 
  
 0.922
garK
Glycerate kinase 2; Belongs to the glycerate kinase type-1 family.
 
  
 0.631
glxK_1
Glycerate kinase family protein; Belongs to the glycerate kinase type-1 family.
 
  
 0.630
eda
Eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein.
 
   
 0.622
edd
Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
  
  
 0.614
xylB_1
Hypothetical protein; FGGY family of carbohydrate kinase, N-terminal domain protein; Belongs to the FGGY kinase family.
 
  
 0.524
xylB_2
Hypothetical protein; FGGY family of carbohydrate kinase, N-terminal domain protein.
 
  
 0.516
lyx
Hypothetical protein; FGGY family of carbohydrate kinase, N-terminal domain protein.
 
  
 0.478
xylB-2
xylB: xylulokinase.
 
  
 0.472
xylB
xylB: xylulokinase.
 
  
 0.467
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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