Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
edaEda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein. (208 aa)    
Predicted Functional Partners:
edd
Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
 
 
 0.997
ydjH_1
pfkB carbohydrate kinase family protein.
 
 
 0.956
glk
Glk: glucokinase; Belongs to the bacterial glucokinase family.
 
 
 0.953
ydjH_2
pfkB carbohydrate kinase family protein.
 
 
 0.952
aceA
Isocit_lyase: isocitrate lyase.
     
 0.913
DM82_2515
FAD binding domain protein.
   
 
 0.909
glcD
glcD: glycolate oxidase, subunit GlcD.
   
 
 0.909
DM82_2516
FAD binding domain protein.
   
 
 0.908
lutA_2
4Fe-4S binding domain protein.
     
 0.908
DM82_4409
FAD binding domain protein.
   
 
 0.908
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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