Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
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experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
paaBpaaB1: phenylacetate degradation putative enoyl-CoA hydratase PaaB. (263 aa)    
Predicted Functional Partners:
paaA
Phenylacetic acid catabolic family protein.
 
 
 0.987
paaJ
PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit.
 
 
 0.986
paaC
Phenylacetic acid catabolic family protein.
 
 
 0.979
DM82_2945
Phenylacetic acid degradation B.
 
 
 0.974
echA8_3
enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
0.965
hmp_2
2Fe-2S iron-sulfur cluster binding domain protein.
 
 
 0.953
paaH_3
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein.
 0.918
paaD
paaD: phenylacetic acid degradation protein PaaD.
 
 
 0.911
DM82_2718
Thiolase, N-terminal domain protein.
 
 0.845
DM82_2719
acCoA-C-Actrans: acetyl-CoA C-acetyltransferase family protein.
 
 0.836
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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