STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltB_2Glutamine amidotransferases class-II family protein. (1567 aa)    
Predicted Functional Partners:
gltD
Glutamate synthase, NADH/NADPH, small subunit domain protein.
 0.999
fadH_1
NADH:flavin oxidoreductase / NADH oxidase family protein.
  
 
 0.999
fadH_2
NADH:flavin oxidoreductase / NADH oxidase family protein.
  
 
 0.999
gdhA
glu/Leu/Phe/Val dehydrogenase, dimerization domain protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.993
carB
CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.
  
 
 0.976
glnA
glnA: glutamine synthetase, type I.
  
 
 0.968
puuA_1
Glutamine synthetase, catalytic domain protein.
  
 
 0.968
glmS
Glutamine-fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
   
 0.968
glnA-2
glnA: glutamine synthetase, type I.
  
 
 0.968
puuA_2
Glutamine synthetase, catalytic domain protein.
  
 
 0.968
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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