Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
clcD_1Dienelactone hydrolase family protein. (230 aa)    
Predicted Functional Partners:
clcD_2
Chlorophyllase family protein.
  
  
 
0.924
catB
Mucon_cyclo: muconate and chloromuconate cycloisomerases family protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
   
 
 0.907
nylA
Amidase family protein; Belongs to the amidase family.
  
  
 0.626
DM82_4045
Phosphotransferase enzyme family protein.
  
  
 0.499
DM82_2987
Nitronate monooxygenase family protein.
     
 0.425
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.