Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DM82_3030Putative lipoprotein/NMB1164; putative lipoprotein NMB1126/NMB1164. (225 aa)    
Predicted Functional Partners:
DM82_3029
Putative lipoprotein.
 
    0.986
DM82_3028
Putative lipoprotein/NMB1162; putative lipoprotein NMB1124/NMB1162.
 
    0.970
DM82_3031
Hypothetical protein.
       0.565
flgH_1
Flagellar L-ring family protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
 
 0.520
flgH_2
Flagellar L-ring family protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
 
 0.520
flgE_1
flgEFG_subfam: flagellar hook-basal body family protein.
   
 
 0.518
flgE
Flagellar hook protein flgE.
   
 
 0.518
flgB
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
   0.504
flgC
flgC: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.504
flgC-2
flgC: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.504
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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