STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Coexpression
Experiments
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[Homology]
Score
cadAATPase-IB1_Cu: copper-translocating P-type ATPase. (706 aa)    
Predicted Functional Partners:
copA_1
ATPase-IB1_Cu: copper-translocating P-type ATPase.
 
 
0.884
DM82_3518
Heavy-metal-associated domain protein.
  
 
 0.869
DM82_3101
Double zinc ribbon family protein.
       0.779
cadR
cadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator.
 
  
 0.702
DM82_3103
Hypothetical protein.
       0.538
nirK
Cu_nitrite_red: nitrite reductase, copper-containing; Belongs to the multicopper oxidase family.
 
  
 0.491
fieF
CDF: cation diffusion facilitator transporter family protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
 
 
 0.419
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
    0.417
ribD-2
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
    0.417
zitB
CDF: cation diffusion facilitator transporter family protein.
  
  
 0.405
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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