Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
DM82_3163C-type lysozyme/alpha-lactalbumin family protein. (149 aa)    
Predicted Functional Partners:
spaK
Invasion B family protein.
   
    0.776
DM82_2684
Hypothetical protein.
  
     0.590
bfpB
pilus_B_mal_scr: type IVB pilus formation outer membrane protein, R64 PilN family.
 
  
 0.585
DM82_2263
Transglycosylase SLT domain protein.
  
   
 0.543
invG_1
type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family.
 
  
 0.532
arnT
Dolichyl-phosphate-mannose-mannosyltransferase family protein.
  
    0.518
DM82_3175
Type II secretion system (T2SS), N family protein.
  
     0.518
DM82_1657
Tetratricopeptide repeat family protein.
  
     0.516
mltB
mltB: lytic murein transglycosylase B.
  
   
 0.501
invG_5
type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family.
 
  
 0.489
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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