STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM82_317Hypothetical protein. (222 aa)    
Predicted Functional Partners:
bcsE
cellulose_bcsE: cellulose biosynthesis protein BcsE.
  
     0.772
DM82_1424
Hypothetical protein.
  
     0.770
DM82_5422
Putative lipoprotein.
  
     0.769
DM82_4554
Copper resistance D family protein.
  
     0.767
lasR_2
Bacterial regulatory s, luxR family protein.
  
     0.759
lifO
Lipase chaperone; May be involved in the folding of the extracellular lipase during its passage through the periplasm; Belongs to the lipase chaperone family.
  
     0.755
DM82_1625
Gram-negative porin family protein.
  
     0.752
lsdA
Levansucrase; Belongs to the glycosyl hydrolase 68 family.
  
     0.751
acsC
Cellulose synthase operon C family protein.
  
     0.737
pcp-3
Pseudomonalisin.
  
     0.717
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.