Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DM82_3181lrgA family protein. (155 aa)    
Predicted Functional Partners:
yohK
lrgB-like family protein.
 
  
 0.993
cynR_3
Bacterial regulatory helix-turn-helix, lysR family protein; Belongs to the LysR transcriptional regulatory family.
 
     0.849
DM82_6056
PAP2 superfamily protein.
  
     0.523
DM82_6122
Hypothetical protein.
  
     0.495
DM82_3029
Putative lipoprotein.
  
     0.488
DM82_3028
Putative lipoprotein/NMB1162; putative lipoprotein NMB1124/NMB1162.
  
     0.487
DM82_5705
Hypothetical protein.
  
     0.475
DM82_5989
tonB-copper: TonB-dependent copper receptor.
  
     0.447
DM82_3030
Putative lipoprotein/NMB1164; putative lipoprotein NMB1126/NMB1164.
  
     0.435
DM82_34
PAP2 superfamily protein.
  
     0.414
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.