Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
basR_1 | evgS | DM82_3152 | DM82_3900 | Hypothetical protein; Transcriptional regulatory, C terminal family protein. | Response regulator. | 0.937 |
basR_1 | qseC_2 | DM82_3152 | DM82_167 | Hypothetical protein; Transcriptional regulatory, C terminal family protein. | HAMP domain protein. | 0.799 |
basR_1 | qseC_3 | DM82_3152 | DM82_4788 | Hypothetical protein; Transcriptional regulatory, C terminal family protein. | HAMP domain protein. | 0.790 |
basR_1 | rssA_2 | DM82_3152 | DM82_3196 | Hypothetical protein; Transcriptional regulatory, C terminal family protein. | His Kinase A domain protein. | 0.827 |
basR_2 | basR_6 | DM82_3197 | DM82_4787 | Hypothetical protein; Transcriptional regulatory, C terminal family protein. | Hypothetical protein; Transcriptional regulatory, C terminal family protein. | 0.905 |
basR_2 | evgS | DM82_3197 | DM82_3900 | Hypothetical protein; Transcriptional regulatory, C terminal family protein. | Response regulator. | 0.949 |
basR_2 | qseC_2 | DM82_3197 | DM82_167 | Hypothetical protein; Transcriptional regulatory, C terminal family protein. | HAMP domain protein. | 0.979 |
basR_2 | qseC_3 | DM82_3197 | DM82_4788 | Hypothetical protein; Transcriptional regulatory, C terminal family protein. | HAMP domain protein. | 0.982 |
basR_2 | rssA_2 | DM82_3197 | DM82_3196 | Hypothetical protein; Transcriptional regulatory, C terminal family protein. | His Kinase A domain protein. | 0.995 |
basR_3 | evgS | DM82_168 | DM82_3900 | Hypothetical protein; Transcriptional regulatory, C terminal family protein. | Response regulator. | 0.934 |
basR_3 | qseC_2 | DM82_168 | DM82_167 | Hypothetical protein; Transcriptional regulatory, C terminal family protein. | HAMP domain protein. | 0.951 |
basR_3 | qseC_3 | DM82_168 | DM82_4788 | Hypothetical protein; Transcriptional regulatory, C terminal family protein. | HAMP domain protein. | 0.826 |
basR_3 | rssA_2 | DM82_168 | DM82_3196 | Hypothetical protein; Transcriptional regulatory, C terminal family protein. | His Kinase A domain protein. | 0.832 |
basR_4 | basR_5 | DM82_199 | DM82_4739 | Response regulator. | Hypothetical protein; Transcriptional regulatory, C terminal family protein. | 0.902 |
basR_4 | evgS | DM82_199 | DM82_3900 | Response regulator. | Response regulator. | 0.888 |
basR_4 | qseC_2 | DM82_199 | DM82_167 | Response regulator. | HAMP domain protein. | 0.809 |
basR_4 | qseC_3 | DM82_199 | DM82_4788 | Response regulator. | HAMP domain protein. | 0.811 |
basR_4 | rssA_2 | DM82_199 | DM82_3196 | Response regulator. | His Kinase A domain protein. | 0.825 |
basR_5 | basR_4 | DM82_4739 | DM82_199 | Hypothetical protein; Transcriptional regulatory, C terminal family protein. | Response regulator. | 0.902 |
basR_5 | evgS | DM82_4739 | DM82_3900 | Hypothetical protein; Transcriptional regulatory, C terminal family protein. | Response regulator. | 0.929 |
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