STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ascD2Fe-2S iron-sulfur cluster binding domain protein. (343 aa)    
Predicted Functional Partners:
fadH_1
NADH:flavin oxidoreductase / NADH oxidase family protein.
  
 0.981
fadH_2
NADH:flavin oxidoreductase / NADH oxidase family protein.
  
 0.981
gltD
Glutamate synthase, NADH/NADPH, small subunit domain protein.
  
 0.976
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 
 0.961
pyrDB
Dihydroorotate dehydrogenase family domain protein; Catalyzes the conversion of dihydroorotate to orotate.
  
 
 0.961
ppsE_2
AMP-binding enzyme family protein.
  
 0.936
pksM
Thioester-redct: thioester reductase domain protein.
  
 0.931
ddhC
CDP-4-keto-6-deoxy-D-glucose-3-dehydrase.
  
 
 0.924
rfbG
CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase.
  
 
 0.918
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
  
 0.915
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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