Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DM82_3220Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein. (378 aa)    
Predicted Functional Partners:
fadJ_1
enoyl-CoA hydratase/isomerase family protein.
 
 0.987
echA8_3
enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.952
pcaF_1
acCoA-C-Actrans: acetyl-CoA C-acetyltransferase family protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.942
paaJ-2
acCoA-C-Actrans: acetyl-CoA C-acetyltransferase family protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.942
fadB
enoyl-CoA hydratase/isomerase family protein.
 
 0.873
fadJ_2
enoyl-CoA hydratase/isomerase family protein.
 
 0.869
DM82_77
enoyl-CoA hydratase/isomerase family protein.
  
 0.835
DM82_897
Electron transfer flavodomain protein.
 
 
 0.812
etfA_2
Electron transfer flavoFAD-binding domain protein.
 
 0.788
etfA_3
Electron transfer flavodomain protein.
 
 
 0.779
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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