STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mauCCopper binding s, plastocyanin/azurin family protein. (104 aa)    
Predicted Functional Partners:
DM82_3226
Hypothetical protein.
 
     0.829
nirK
Cu_nitrite_red: nitrite reductase, copper-containing; Belongs to the multicopper oxidase family.
 
 
 
 0.712
rpoE_3
sigma70-ECF: RNA polymerase sigma factor, sigma-70 family protein.
 
     0.658
petA
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.576
mco
Multicopper oxidase family protein.
   
 
 0.560
copA_2
Multicopper oxidase family protein.
   
 
 0.560
DM82_5518
Methyltransferase, family protein; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
  
     0.441
DM82_1715
Hypothetical protein.
  
     0.433
DM82_1560
Zinc-finger family protein.
 
     0.404
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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