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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mauCCopper binding s, plastocyanin/azurin family protein. (104 aa)    
Predicted Functional Partners:
DM82_3226
Hypothetical protein.
 
     0.829
nirK
Cu_nitrite_red: nitrite reductase, copper-containing; Belongs to the multicopper oxidase family.
 
 
 
 0.762
DM82_5423
PQQ enzyme repeat family protein.
 
 
   0.695
rpoE_3
sigma70-ECF: RNA polymerase sigma factor, sigma-70 family protein.
 
     0.660
mco
Multicopper oxidase family protein.
   
 
 0.618
copA_2
Multicopper oxidase family protein.
   
 
 0.618
DM82_1928
Lactonase, 7-bladed beta-propeller family protein.
   
   0.582
DM82_6294
Phosphoesterase family protein.
   
   0.565
nuoM
NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M family protein.
    
   0.555
DM82_366
Peptidase M66 family protein.
   
   0.554
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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