Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pimBGlycosyl transferases group 1 family protein. (422 aa)    
Predicted Functional Partners:
wcaJ_2
wcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.733
wcaJ_1
EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase family protein.
 
  
 0.723
wcaJ_3
wcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.723
mfpsA_1
Glycosyl transferases group 1 family protein.
 
     0.712
DM82_34
PAP2 superfamily protein.
  
    0.692
treZ
Carbohydrate-binding module 48 family protein; Belongs to the glycosyl hydrolase 13 family.
  
 0.672
DM82_2468
Glycosyl transferases group 1 family protein.
 
     0.604
DM82_2471
Glycosyl transferases group 1 family protein.
  
     0.557
DM82_5934
Polysaccharide biosynthesis family protein.
 
  
 0.518
glgA
Glycosyl transferases group 1 family protein.
  
   
 0.504
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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