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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM82_3330Phage late control D family protein. (366 aa)    
Predicted Functional Partners:
DM82_3336
Phage tail sheath family protein.
 
 
 0.994
DM82_3331
Phage P2 GpU family protein.
 
  
 0.993
DM82_3341
25-like lysozyme family protein.
 
 
 0.991
DM82_3057
25-like lysozyme family protein.
 
 
 0.988
DM82_3335
Tail_tube: phage major tail tube protein.
 
  
 0.980
DM82_3339
tail_P2_I: phage tail protein I.
 
  
 0.980
DM82_3340
Baseplate J-like family protein.
 
  
 0.973
DM82_3058
Putative baseplate assembly protein J GpJ.
 
  
 0.964
DM82_3047
Phage Tail Protein X family protein.
 
  
 0.962
DM82_3352
Phage Tail Protein X family protein.
 
  
 0.962
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.