STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yghZ_1Aldo/keto reductase family protein. (347 aa)    
Predicted Functional Partners:
gla
MIP: MIP channel s family protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
 
 0.561
aqpZ2
MIP channel s family protein; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
 
 0.561
gfo
Oxidoreductase, NAD-binding Rossmann fold family protein.
 
  
 0.530
dkgB
Aldo/keto reductase family protein.
 
 
0.522
bglB
Hypothetical protein; Glycosyl hydrolase family 3 C-terminal domain protein.
  
     0.519
DM82_3401
Hypothetical protein.
       0.512
yhdN_1
Aldo/keto reductase family protein.
 
 
0.507
lgrD_1
NRPS-para261: non-ribosomal peptide synthase TIGR01720 domain protein.
   
 0.487
tycC_2
AA-adenyl-dom: amino acid adenylation domain protein.
   
 0.487
katE
Catalase family protein; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.432
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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