Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
aidB_3Hypothetical protein; acyl-CoA dehydrogenase, C-terminal domain protein. (559 aa)    
Predicted Functional Partners:
fadJ_1
enoyl-CoA hydratase/isomerase family protein.
 
 0.871
fadB
enoyl-CoA hydratase/isomerase family protein.
 
 0.855
fadJ_2
enoyl-CoA hydratase/isomerase family protein.
 
 0.854
DM82_77
enoyl-CoA hydratase/isomerase family protein.
  
 0.839
calB
Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
  
 
  0.751
DM82_5594
Carboxyl transferase domain protein.
  
 
 0.633
lgrD_1
NRPS-para261: non-ribosomal peptide synthase TIGR01720 domain protein.
  
 
 0.624
tycC_2
AA-adenyl-dom: amino acid adenylation domain protein.
  
 
 0.624
DM82_1770
Acyl CoA binding family protein.
   
 0.550
etfB
Electron transfer flavodomain protein.
  
 
 0.548
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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