Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DM82_3429Flagellar FliT family protein. (108 aa)    
Predicted Functional Partners:
DM82_3024
Flagellar FliT family protein.
     
  0.900
DM82_3430
Flagellar hook-length control FliK family protein.
 
     0.849
fliS
fliS: flagellar protein FliS.
 
     0.832
DM82_3478
flgN family protein.
  
     0.684
flhD_2
Flagellar transcriptional activator family protein; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family.
  
     0.672
fliJ
flagell_FliJ: flagellar export protein FliJ.
 
     0.672
DM82_458
Gram-negative porin family protein.
  
     0.662
flgM
flgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM.
  
     0.653
DM82_3424
Flagellar assembly FliH family protein.
 
     0.610
flhB_2
flhB HrpN YscU SpaS family protein.
       0.599
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.