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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM82_3433xdhC and CoxI family protein. (341 aa)    
Predicted Functional Partners:
DM82_5345
mobA-like NTP transferase domain protein.
 
  
 0.901
iorA_2
[2Fe-2S] binding domain protein.
 
  
 0.842
iorA_1
[2Fe-2S] binding domain protein.
 
  
 0.842
iorB_1
Molybdopterin-binding domain of aldehyde dehydrogenase family protein.
 
  
 0.832
iorB_2
Molybdopterin-binding domain of aldehyde dehydrogenase family protein.
 
  
 0.820
xdhA
xanthine_xdhA: xanthine dehydrogenase, small subunit.
 
  
 0.763
xdhB
xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit.
 
  
 0.741
moaC
Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
 
  
 0.483
aroP_1
Amino acid permease family protein.
       0.450
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.