Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DM82_3557Serine hydrolase family protein. (211 aa)    
Predicted Functional Partners:
ghrA_1
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein.
       0.513
DM82_3556
glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein.
       0.510
DM82_1838
vgr_GE: Rhs element Vgr family protein.
   
    0.451
DM82_2797
vgr_GE: Rhs element Vgr family protein.
   
    0.451
DM82_4625
vgr_GE: Rhs element Vgr family protein.
   
    0.451
DM82_4626
vgr_GE: Rhs element Vgr family protein.
   
    0.451
DM82_880
vgr_GE: Rhs element Vgr family protein.
   
    0.451
DM82_884
vgr_GE: Rhs element Vgr family protein.
   
    0.451
DM82_886
vgr_GE: Rhs element Vgr family protein.
   
    0.451
ybaK_1
aminoacyl-tRNA editing domain protein.
 
     0.412
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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