Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
traCPrimase C terminal 2 family protein. (953 aa)    
Predicted Functional Partners:
intA
Phage integrase family protein; Belongs to the 'phage' integrase family.
 
  
 0.687
DM82_3269
Phage integrase family protein.
 
  
 0.675
DM82_352
Hypothetical protein.
       0.561
DM82_355
Hypothetical protein.
       0.561
DM82_356
Hypothetical protein.
       0.511
nagE
PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component.
   
  
 0.505
DM82_353
Hypothetical protein.
       0.502
DM82_354
Hypothetical protein.
       0.502
ssb
Single-stranded DNA-binding family protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
  
    0.498
DM82_3270
Putative dNA-damage-inducible protein D.
       0.462
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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