Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fabG_6Short chain dehydrogenase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (259 aa)    
Predicted Functional Partners:
dsbA
Thiol:disulfide interchange protein DsbA.
       0.747
lgrD_1
NRPS-para261: non-ribosomal peptide synthase TIGR01720 domain protein.
  
 
 0.737
tycC_2
AA-adenyl-dom: amino acid adenylation domain protein.
  
 
 0.737
DM82_3595
Sporulation related domain protein.
       0.634
fabG_3
Short chain dehydrogenase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.608
DM82_3597
Hypothetical protein.
 
     0.584
DM82_3751
Lipopolysaccharide-assembly, LptC-related family protein.
 
     0.564
DM82_5617
Short chain dehydrogenase family protein.
  
 
   0.558
argS
argS: arginine--tRNA ligase.
       0.516
fabG_17
Short chain dehydrogenase family protein.
  
 
   0.482
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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