Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DM82_3607P-aminobenzoate N-oxygenase AurF family protein. (288 aa)    
Predicted Functional Partners:
rfaE-2
Bifunctional protein RfaE; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.
       0.662
DM82_67
SCP-2 sterol transfer family protein.
 
     0.498
DM82_2418
Hypothetical protein.
  
     0.487
DM82_1723
Hypothetical protein; nfeD-like C-terminal, partner-binding family protein.
  
     0.473
ccsB-2
resB-like family protein.
  
     0.457
rbr1
Rubrerythrin family protein.
  
  
 0.416
DM82_4104
Gram-negative porin family protein.
  
     0.413
DM82_1514
Putative membrane protein.
  
     0.402
DM82_639
Hypothetical protein.
  
     0.401
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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