STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DM82_3619Mce related family protein. (309 aa)    
Predicted Functional Partners:
DM82_3618
Miro-like family protein.
 
 0.998
mlaE_2
Hypothetical protein.
 
 0.997
DM82_3620
Hypothetical protein.
 
   0.991
mlaE_1
Hypothetical protein.
  
 0.970
DM82_2849
ABC transporter family protein.
  
 0.965
mlaC_1
Putative signal peptide protein.
  
 0.963
mlaC_2
Putative signal peptide protein.
  
 0.963
DM82_2844
STAS domain protein.
 
 0.940
mlaD
Mce related family protein.
     
  0.900
yiaD_2
ompA family protein.
   
   0.733
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.